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Load a plasmid
Click here or drag and drop a DNA file (.gb / .gbk / .ape / .fasta / .fastq) anywhere on this page.
Plasmid
Feature Types
(overrides per-feature custom colors while checked)
| Type | Label | Location | Strand | Size |
|---|
No enzymes enabled
Matches
| Enzyme | Site | Temp | Strand | Site location | Top-strand cut | Bottom-strand cut |
|---|
Predicted gel
Enable one or more enzymes above to see predicted fragments and a virtual gel. Ladder: NEB 1 kb Plus DNA Ladder.
Alignment viewer
Drop
.gb / .gbk / .fasta / .ab1 files here to align against the current reference.
Pre-computed consensus assemblies (Plasmidsaurus, pLannotate, etc.) work best; Sanger .ab1 reads are treated as partial reads.
Drop reads here
No reads loaded. Click ＋ Add reads or drop files above.
Primer annealing
Primers collected from every plasmid in your vault, matched against this plasmid's sequence (both strands, wraps at origin if circular).
Exact full-length binding only.
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